Taesoo Kim
Seoul/Gwangjin-gu,Republic of Korea
Summary
Accomplished bioinformatics specialist with expertise in next generation sequencing and Oxford Nanopore MinION sequencing. Proficient in Linux/Unix command line operations, metagenomic analysis, and complete bacterial genome analysis. Demonstrated ability in antimicrobial resistance analysis and SOP development, contributing to advancements in genomic research. Committed to leveraging skills to drive innovation in bioinformatics and enhance understanding of microbial genomics.
Overview
5
5
years of professional experience
Work history
Ph. D. Candidate
Konkuk University, College of Veterinary Medicine
Seoul, Republic of Korea
09.2021 - Current
- Developed and optimized a metagenomic analysis pipeline to identify causative pathogens in infectious diseases of unknown etiology.
- Established a standard operating procedure (SOP) for bacterial complete genome analysis.
- Designed the SOP to cover the full workflow from high-quality genomic DNA extraction and Oxford Nanopore MinION sequencing to complete genome assembly.
- Performed novel SCCmec characterization and complete genome analysis of Staphylococcus pseudintermedius isolates.
Education
Doctor of Veterinary Medicine (DVM) - Veterinary Medicine
Konkuk University, College of Veterinary Medicine
SeoulDoctor of Philosophy - Veterinary Microbiology
Konkuk University, College of Veterinary Medicine
SeoulSkills
- Bioinformatics
- Next Generation Sequencing
- Oxford Nanopore MinION Sequencing
- Linux/Unix Command line
- Metagenomic Analysis
- Complete Bacterial Genome Analysis
- Antimicrobial Resistance Analysis
- SOP Development
Timeline
Ph. D. Candidate
Konkuk University, College of Veterinary Medicine
09.2021 - Current
Doctor of Veterinary Medicine (DVM) - Veterinary Medicine
Konkuk University, College of Veterinary Medicine
Doctor of Philosophy - Veterinary Microbiology
Konkuk University, College of Veterinary Medicine